Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSVCNVPISGLMACKPAVT----PPNPSA----PTSACCSALTHADMRCLCSYKNSNVLPS--------------L-G--ID----PNLALQLPPKCKLPRPNC
1B1U Chain:A ((11-108))
----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20855 for 442 contacts (-47.2/contact) +
2D Compatibility (PS) -7067 + (NN) -4412 + (LL) 316
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -34768.0 ( -78.66 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: