Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVCNLSSAGIRACQPAAAIRNPTDQPSSECCAALAG-ADLA---CLCRYKNAAGVWVRFYRIDINRAMGLPGK-CGLAMPAN--C---
1HYP Chain:? ((6-80))
----PSCP----DLSICLNILGGSLG---TVDDCCALIGGLGDIEAIVCLCIQLRALGI------LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23655 for 378 contacts (-62.6/contact) +
2D Compatibility (PS) -6873 + (NN) -3331 + (LL) 1632
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -38827.0 ( -102.72 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: