Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVKYLMNG---T--GK-P-----------PAACCSGISAIQATASTTADKQAACNCIKSASKQI-N-P---N-----PQLAQALPANCGITLP--FAVSPNVDCSKIT
1W2Q Chain:A ((23-121))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME------NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36307 for 417 contacts (-87.1/contact) +
2D Compatibility (PS) -7065 + (NN) -2541 + (LL) 1468
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -48595.0 ( -116.53 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: