Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------ALTCGTVTSALSPCITYVRN---GGSVP----ASCCQGVAALNSAAKTTADRQAACSCLKSALSSV-------SGIQ----PSLASSLPGKCGVSIPYQISPSTDCSKVK---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51648 for 513 contacts (-100.7/contact) +
2D Compatibility (PS) -7991 + (NN) -3078 + (LL) 832
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -69885.0 ( -136.23 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: