Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------QECLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKDCICNALRAATT----------------------------------FTATCNLPSLD----C-----
1BEA Chain:? ((5-120))
SCVPGWAIPHNPLPSCRWYVTS-RTCG--IGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14253 for 355 contacts (-40.1/contact) +
2D Compatibility (PS) -6140 + (NN) -759 + (LL) 244
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -24508.0 ( -69.04 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: