Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDRMALKLAPCASAAQNPS------S---APSNGCCTAVHTIGKQSPQCLCAVMLSK---TAKK------------SG----I-K-PEVAITIPKRCNLVDRPVGYKCGDYTLP
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32701 for 408 contacts (-80.1/contact) +
2D Compatibility (PS) -6569 + (NN) -1220 + (LL) 412
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -43028.0 ( -105.46 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: