Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------QSSSSCTNVLVSMSPCLDYIQGNSSKPS---SSCCSQLANVVRSQPQCLCEVLN----------GGASSLGVSVNQTQAMALPTACNVKTPPASQCNATIL----------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQC-------NGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33605 for 490 contacts (-68.6/contact) +
2D Compatibility (PS) -8202 + (NN) -3303 + (LL) 696
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -49214.0 ( -100.44 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: