Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DSDQDKEECTQQLVALATCLPYVGGDAKAPTPDCCSGLKQVLNN-NKKCLCVIIKDRNDPDLGLNINVTLALALP-SVCNAPANV-SKCPG
1HYP Chain:A ((11-78))
---------------LSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCP-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53280 for 413 contacts (-129.0/contact) +
2D Compatibility (PS) -6405 + (NN) -1714 + (LL) 332
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -68817.0 ( -166.63 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: