Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------ACNAMTLQPCLAASQGKVAPDPACCTAIKNIGLSADGPQCLCTLATG---PLAKANGVS--------ADAAMAIPKKCGLPVPKGFMCNNKPV-------PGS
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVL-RDCCQQLAHI-----SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37771 for 470 contacts (-80.4/contact) +
2D Compatibility (PS) -8548 + (NN) -6154 + (LL) -32
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -55355.0 ( -117.78 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: