Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QP------SPNPSCGAQLSQLGPCARYSVPPMPGQALPAPGPECCSALGSVSRDCACG-----------------------AIDIINSLPAKCGLPRISCQ-----------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRL-QCNG----SQVPEAVL----RDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16912 for 362 contacts (-46.7/contact) +
2D Compatibility (PS) -6508 + (NN) -2026 + (LL) 224
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -29722.0 ( -82.10 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: