Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EVSCGDSVRALIPCGSFLV----GADAAAAP--------SESCCRGALALRGMASTTAARRELCKCLMQSGPS-F---G-V-------LPDRARQLPARCNLGVAIPVGPETDCDKIP
2LVF Chain:A ((16-101))
--------QMLSHCRMYMRQQMEES-TYQTMPRRGMEPHMSECCEQLEGM--------DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS---------------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26268 for 341 contacts (-77.0/contact) +
2D Compatibility (PS) -6187 + (NN) 662 + (LL) 1132
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -33261.0 ( -97.54 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: