Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVQCGQVTQLMAPCMPYLSGA--PGMT---PYGICCNSLRVLAELAATTADRVAACNCVRAAAGA----GGF---PP----VDFTRAAGLPAACGLKINFAISPNMDCNQVTDEP
1HSS Chain:A ((15-105))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVV---------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54587 for 416 contacts (-131.2/contact) +
2D Compatibility (PS) -6600 + (NN) 993 + (LL) 1864
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -63480.0 ( -152.60 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: