Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-AQCNGSPAM--LASC------LPATQSSTSYPGAQCCSSLTRFRGNPDCLCSTM---LTARQQFTFSVPN---------AFTIPERCGYANEIPPHYKCGNYVVGH--------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEW--CRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLP--IVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50226 for 485 contacts (-103.6/contact) +
2D Compatibility (PS) -8560 + (NN) -3211 + (LL) -192
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -66089.0 ( -136.27 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: