Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------MADNLYLYKGSVKITEMTLN-LNEAKIIVYEDSGGNKYTLDASGISTL-TNIDDI---------------KLSDLLEGKVKFIYQKKDSNAIQIKGLGNIISTLLAT-QKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAE--KILPAKDGQKSILVEKLGGLLGEPGAVYGDSNPKITAKDFLAEKASLVKTDGSNIVTQTDKGKALVEAILNAKEPISNKEVKIVETELAKTFVKTADLGTPAVA-GKVLDAKDGQKSILVEKLGRFLDTTSTEYSNQTAKVFSGEKGTKPTAEEVVTKLLANNKKDLTDEVAQNPGLRAAVTSNSGLRGTVIDNLK----GDTDFKTDITIQVDAKDPAFQGFVREIISQPSFEIPTSDDAPL--SWDWI |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGST--LPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQ---NSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFS--VQRNLPFERATIMAAFKGNTEGRT-----SDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNP-------IVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 90089 for 2643 contacts (34.1/contact) +
2D Compatibility (PS) -39302 + (NN) -4960 + (LL) 1876
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: 38753.0 ( 14.66 by residue)
QMean score : 0.208
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