Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNYYEILEY---VAPEEINKAYKRLGLKCHPDKLL--PKKRKISRIVKKAINGAALSKLELEEMQSL
2YS8 Chain:A ((27-85))--KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAV-VNART--ALLKNIKSGPSSG


General information:
TITO was launched using:
RESULT:

Template: 2YS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13888 for 334 contacts (-41.6/contact) +
2D Compatibility (PS) -5522 + (NN) -2624 + (LL) 516
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -25868.0 ( -77.45 by residue)
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_2YS8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YS8-query.scw
PDB file : Tito_Scwrl_2YS8.pdb: