Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDWLLVSILSIIFVLLILSFLFSGAEIGLTSVSRSRVNKLKLDGNKRAKIIDHLLNKKELTIGTILLGNTIINITCSVLFTAIFINLFGNESVFLSTIVMTFCILLFCEVLPKTYAMQNPEKFTSFSAYFVLFFVKIFSPLTLGIQFIVNFILKLCGFHKNREAISAADAMRNMIALHRSEGTMLQQDLDMLSSILDLAETEISEIMTHRRNLFSLDIDRNKEELIKEILTSSHSRVPLWQKELDNIVGVVHVKNLINALREKDNKIEEVDIAQVMS-KPCFLPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKMSDNVYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPDEGEEFSMFGFYFRILKKDKNIITVIEVQVKTDNTVTAID |
3OCM Chain:A ((18-164)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE------GRVRRNRLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73526 for 1006 contacts (-73.1/contact) +
2D Compatibility (PS) -15603 + (NN) -2373 + (LL) 23600
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -81252.0 ( -80.77 by residue)
QMean score : 0.451
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