Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPDIEDEFHVFDALNTPSHHPAREEQDTFYLKNKIN----------DKRMMLRTHTSSMQIRAMKKAKTFPIKIVAAGRVYRND-FDATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFGDKELKIRFRNSFFPFTEPSAEVDISYKE-SKWIEVLGCGIVHPNVFQNVGIDHTK---------YSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
| 1EIY Chain:A ((6-350)) | ----------------LAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSAL-PLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTP-PFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFG-PDSKVRFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116836 for 2323 contacts (-50.3/contact) +
2D Compatibility (PS) -33566 + (NN) -6931 + (LL) 1744
1D Compatibility (HY) -28400 + (ID) 6350
Total energy: -190339.0 ( -81.94 by residue)
QMean score : 0.434
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