Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL-------------- |
2O5V Chain:A ((2-359)) | --GDVRLSALSTLNYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYLALTGQTDAPRIEQLI--QAGETEAYVRADLQQGGSLSIQEVGLGRGRRQLKVDG--VRARTGDLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRGG--EEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSRKTLALTLTESTSP--ETYAADLRGRRAEELARGSTVTGPHRDDLLLTLGDFPASDYA-SRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELD-PHRRQYLLDLAASVPQAIVTGTELAPGAALTLRAQAGRFTPVADEEMQAEGTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163945 for 2857 contacts (-57.4/contact) +
2D Compatibility (PS) -36835 + (NN) -10746 + (LL) 1360
1D Compatibility (HY) 1200 + (ID) 3200
Total energy: -212166.0 ( -74.26 by residue)
QMean score : 0.386
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