Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISPILPVYSPININFSYGKGIYLYNIDGKRYIDFHSGIAVSSLGHTNLQLTSVLNLQGERLWHISNTYNIPTANNFAEKL--INNSFADTVFFANSGSEAVECGLKIARVYQNGKGNKNRYRILTFHGAFHGRTFLTCATNDKRKFSELLNPYIDWCDNIEPN-IESVKKAISNDIGVMLIEPIQGQGGIKVMNDAFMKELRKLCDENDILLFFDCIQCGTGRTGKLFAYEHIGVKPDICALAKGIGGGFPLGVCLATEKAAQYITVGMHGSTFGGNPLATSVGNAVLDKLLSPGFLGNVEIRGKHLKNKLEDLASKFPIIEEVRGKGLMLGIKVKMDNQKFAGEL--SHRGL-LTVGATSDNVVRIFPPLIITEKEIDEGIEILTQYLSEKSSDPYQYER |
| 1WKH Chain:B ((23-395)) | --------VYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTG------RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS--PKIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPT---VIRFLPPLVIEKEDLERVVEAVRAVLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267340 for 3322 contacts (-80.5/contact) +
2D Compatibility (PS) -40106 + (NN) -17778 + (LL) 576
1D Compatibility (HY) -21600 + (ID) 6550
Total energy: -352798.0 ( -106.20 by residue)
QMean score : 0.462
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