Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MFSRSFFPEGASLEGKVK---TIAELNQKLESRKSHSAEKVHQGF-ERIVELDHQCKGKGIFRSGKVA-------
4DBG Chain:A ((52-133))
TQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSA
General information:
TITO was launched using:
RESULT:
Template:
4DBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6002 for 361 contacts (-16.6/contact) +
2D Compatibility (PS) -6801 + (NN) -603 + (LL) 0
1D Compatibility (HY) -800 + (ID) 400
Total energy: -14606.0 ( -40.46 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_4DBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DBG-query.scw
PDB file :
Tito_Scwrl_4DBG.pdb
: