Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQG-IVLDEPSVVARIKEKG-SYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAA-ESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIV--YSRSARVGGDIMDEAIRSYIRENHKL----------------------------LIGETTAEKIKKSLGSASLPDENN----------KEWMMVKG-RDLVSGMPKEMLLSEYQVA--------------------------------ESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKL-----PVHV-----ADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 3QB0 Chain:A ((19-483)) | -----------------GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEGNK--KIFSEQSIG---IPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGR-----PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTK----NELIGLADLVYSSIMSSDVDLRATLAHN-VVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129249 for 2666 contacts (-48.5/contact) +
2D Compatibility (PS) -35290 + (NN) -11227 + (LL) 1880
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -181086.0 ( -67.92 by residue)
QMean score : 0.473
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