Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMD--DNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTS------SFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRD-------KLLMIDANLNVDQVKQEIESKISCSLV
2ECK Chain:B ((1-210))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEA-----GINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDD-------VTGEELTTRKDDQE-ETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG----
General information:
TITO was launched using:
RESULT:
Template:
2ECK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71253 for 1486 contacts (-47.9/contact) +
2D Compatibility (PS) -20722 + (NN) -4665 + (LL) 1376
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -112064.0 ( -75.41 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2ECK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ECK-query.scw
PDB file :
Tito_Scwrl_2ECK.pdb
: