Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MFLVVTLPFMIFFNNEVGNYKVQFSYGCVYYATNEYVHA--GDKFYSNYFIDSHYGREINMYPQSELLAKGYVGNTLPILISLDKDLIK------------------------------------------------------------------------------------------------------------------------------- |
| 4PHR Chain:A ((1-277)) | SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDLMTGHSIPYQDYNEKLAKRLQQILQTKSDEKLLVCLPD-VFSNMDRYNQNARHFWERHFLKYSEFYLNCCDAPFYGSTFISRPYIDLIDKSP-----SEAYFESLKELWRG--KDLLIVEGATSRSGVGNDLFVAASSIKRLVCPSKNAFQYYDEILRLTEKNAKNRLILVMLGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18342 for 396 contacts (-46.3/contact) +
2D Compatibility (PS) -7892 + (NN) 3053 + (LL) 856
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -26475.0 ( -66.86 by residue)
QMean score : -0.088
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