Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNNLRDFIEALEKKRDLIRIKKEVSTILEMTEIHRRVSLNKGPAIIFENV-----VTENGKSVIPVLVNLFGTIERIAFGLNISPGELRDLGKLLAFLQSPEPPKNLKDVIKMFPLLKVVLSMRSKIVNKA-PCQEVVLTGDDVDLSLLPIQTCWPNEP---APLITWPIVITKGPTEDKQDNFNLGIYRMQVMDKKTTLMRWLAHRGGASHHKRWKENGRSIKFPAAAVIGSDPATLIAAVTPVPETLSEYQFAGLLRKKPLELVNCKTISLQVPAHAEIVLEGY-V-SLDSYRNEGPYGDHTGYYNSVEQFPEFNITAITMRKNPIYLSTFTGKPPDEPSILGEALNEIFVPILINQFPEIVDFYL-PPEGCSYRIAVVSVKKSYPGHAKRIIMGIFSFLKQFLYTKFIIVVDDDINIRDWKEVMWAISTRMDPVRDTVMIENAPIDYLDFASPESGLGGKMGFDATNKMPPETKREWGKKIEMSEEIVKKVTEKWDEYGLTDD |
| 4RAP Chain:A ((10-391)) | --ITPPDTPTQAGPENIFYDFNDGARVLLPEGKWHVRLLDADSENILFCCDVDKGWVTSSKKYFVRFRIQVFRQGATPLLDETL---KLKDRPVLISF-----PTGTLGDLLGWFPYAERFQSLHKCRLECTMSQDIIDLLAPQYP----QIQFSTPDKPRTVAPYATYRVGLYFGGDTNNQ---------------PVDFRKVGFHR------------------SAGYILGVDPREAPVRLDLSAPRVIAAPYVCIATQSTCQAKYWNNGTGWSEVIAHLKSLGYRVMCIDR-------DAHYG-------------QGFVWNHIPWGAEDFTGKLP-----LQERVNLLRH----------ASFFIGLPSGLSWLAWATRIP--------VVLISGFSLPNSEFYTPW-RVFNSHGCYGCWDD------------------TSLNFDHHDFLWCPRHKNTDRQFECTRLITGAQVNGVINKLHRSLT----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112146 for 2996 contacts (-37.4/contact) +
2D Compatibility (PS) -39317 + (NN) -11370 + (LL) 7240
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -171043.0 ( -57.09 by residue)
QMean score : 0.158
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