Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLELKNKISAEAPKTDPSLAGVAANAILDVLGAVPSKP-LRVQAELYKKESNNEEMDHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRLLDNKPGDGSDTPPTPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVKYAMQQKGVIIFGANTIILC-TSLALVYL-QDKAKFIVFFANSPFYITILVIASASLFAVSPIFHIIKQFR-DAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLE---YSNDTHSNFALNAWEAKD-NFINIGEKVISRANKIESIINNRPLFIALLTSVVAANIAFPLGLLAIDGINNVQKFYQNPLTHNVGLSLFIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQER--------------TNVLKDNHGKDAKCISLTLEQVVVQSHNCKDIV----YS-IGE-------- |
| 4I6M Chain:B ((3-439)) | PFR-QDSILIIYPRSQTTLVQFGLN------EETFTVPELEIPTQIYRTTRQDGSYTYHSTN--KDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAEL--------------SNIPLLLITHHSWS--QSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLD------HLVSSIPMG-------GQSINDSLKKLLP-QWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVG---KQRFQGCNNLIKNISNRVGLTLD-------------NIDDINKAKAVWEN---------IIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNMKGPAALWDVQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35463 for 2698 contacts (-13.1/contact) +
2D Compatibility (PS) -37131 + (NN) -5687 + (LL) 4856
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -88075.0 ( -32.64 by residue)
QMean score : 0.210
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