Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKVKLGILISGRGSNMQALMKACQNYGFPAEMACVISNNNKAAGLKVAEQAGMPTFVVENK----PLDVDK-IHEILVQHEVNLVCLAGFMRILKADFLNKWHGKVINVHPSLLPSFKGLNAQEQALKAGVKVTGCTVHYVTSEVDAGAIIAQAAVPVLPNDDIHSLSKRILSEEHKCYVEAVRLIAMLSRKLERP
1RBM Chain:B ((2-185))-----RVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGEN


General information:
TITO was launched using:
RESULT:

Template: 1RBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143962 for 1447 contacts (-99.5/contact) +
2D Compatibility (PS) -20296 + (NN) -15624 + (LL) 736
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -202946.0 ( -140.25 by residue)
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_1RBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RBM-query.scw
PDB file : Tito_Scwrl_1RBM.pdb: