Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNNPNIKLLYIRDLFAKECKEIEE-Y--CILGKKQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAEL---SAKAPYDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILI-P----TDEGMTIALKLT
3DUW Chain:A ((6-222))
----TWTAVDQYVSDVLIPKDSTLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK-YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSN----DPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK-
General information:
TITO was launched using:
RESULT:
Template:
3DUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106518 for 1681 contacts (-63.4/contact) +
2D Compatibility (PS) -22338 + (NN) -7522 + (LL) 1104
1D Compatibility (HY) -12800 + (ID) 2950
Total energy: -151024.0 ( -89.84 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3DUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DUW-query.scw
PDB file :
Tito_Scwrl_3DUW.pdb
: