Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGV--------TDYPFRSIVK--KLGASLLVSEMIASRAMIMQT-----------RQSMQKA-----KVDELTAVQLAGC------------------------EP------------DIMAEAAKLNEDMGAKIIDINFG---------CPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAV--NVPVTVKIRTGWNN----ENRNAPRLAKIAEDLGAKMITVHGRTRAQ--LYNG-QADWKFIRNVKEQVKIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
| 3KRU Chain:A ((15-325)) | -IKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIK-DKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTYTSKEDWPKQYERAFK------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104366 for 1780 contacts (-58.6/contact) +
2D Compatibility (PS) -24529 + (NN) -5340 + (LL) 3884
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -139351.0 ( -78.29 by residue)
QMean score : 0.462
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