Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDLLE-GACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
3N9Y Chain:D ((27-94))
----------------------SLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLD---AITDEENDMLDLAYGLTDRSRLGCQIC---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N9Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28025 for 404 contacts (-69.4/contact) +
2D Compatibility (PS) -6934 + (NN) -223 + (LL) 1852
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -43980.0 ( -108.86 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_3N9Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N9Y-query.scw
PDB file :
Tito_Scwrl_3N9Y.pdb
: