Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTINKDVLAKEKVVVAPEPIEKSEQIFDNGMIKQTTNEGIKEIRKTLNLSELREKTAEELLNLAEERKISTNGKGNGRMLKQEMIFNLMKKMSEEGGITIGSGVVEILPDGFGFLRSANANYAPSTDDVYISNGQIKKFNLRTGDIVCGEIRPPSDKERYFTLTKVQGINFTEVSELRKYVHFDNLLPLYPEESLILENNSSGDNKKDINMRAVDIVAPLGKGQRALIVAPPRTGKTILLQQMAHSIATNHPEIELIVLLIDERPEEVTDMMRSVKGEVVSSTFDEPAYRHVQLAEIVIEKAKRMVEHKKDVVILLDSITRLARAYNAIIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNAEIILDRKLADKRIFPAIDITKSGTRKEELLIDKAILNKIWVLRRILSPMGPVEAMEFLRDKLLLTKSNSDFFNSMNN |
1PVO Chain:E ((1-416)) | -----------------------------------------------MNLTELKNTPVSELITLGENMGL----ENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----G--STEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA----LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184335 for 3419 contacts (-53.9/contact) +
2D Compatibility (PS) -44815 + (NN) -29227 + (LL) 3464
1D Compatibility (HY) -43200 + (ID) 12450
Total energy: -310563.0 ( -90.83 by residue)
QMean score : 0.491
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