Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVV-----VTGMQPGGQLTITMGVENYPGFVS-IQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGA--FFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSFIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
| 4A5L Chain:B ((7-312)) | ---------VVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITE---TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGD--LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218433 for 2532 contacts (-86.3/contact) +
2D Compatibility (PS) -31755 + (NN) -8433 + (LL) 552
1D Compatibility (HY) -26800 + (ID) 6750
Total energy: -291619.0 ( -115.17 by residue)
QMean score : 0.501
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