Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNLESLP--KHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRK------NIDCVSEDEFEKFLYTKDLPKLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
1UEH Chain:B ((17-241))
--------GCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDS--EVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER----
General information:
TITO was launched using:
RESULT:
Template:
1UEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133363 for 1593 contacts (-83.7/contact) +
2D Compatibility (PS) -23017 + (NN) -3386 + (LL) 736
1D Compatibility (HY) -14000 + (ID) 4600
Total energy: -177630.0 ( -111.51 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1UEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEH-query.scw
PDB file :
Tito_Scwrl_1UEH.pdb
: