Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHASTGKGSKIKYSRVLFKISGEALMGSRPFGHDMELIDQLCKDISDIYKLGVQVCIVVGGGNIFRGASASLSGC-ERASSDYIGMLATIINALILQNFLEKNSVNSKVLSAIPMVTICEPYIRRKAIHHLEKGRVVIFAAGTGNPFFTTDTAAALRAVETNCDAILKGTQVNGVYSADPKKNEDAVMYDRLSYMDLLTRDLKVVDASAISLARENSIPIIVFSL-KEEKIVNIVK-GHGTYTIVSDCE
4A7X Chain:E ((7-239))
------------NKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKD-------KKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK---
General information:
TITO was launched using:
RESULT:
Template:
4A7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -215761 for 1867 contacts (-115.6/contact) +
2D Compatibility (PS) -24661 + (NN) -10128 + (LL) 476
1D Compatibility (HY) -24000 + (ID) 5750
Total energy: -279824.0 ( -149.88 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_4A7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A7X-query.scw
PDB file :
Tito_Scwrl_4A7X.pdb
: