Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEY-NMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNADKMVHLSQ
1VD6 Chain:A ((7-223))RPLRLGHRGAPLKAKENTLESFRLALE-AGLDGVELDVWPTRDGVFAVRHDPDTP-----LGPVFQVDYADLKAQ-----------EPDLPRLEEVLALKEAFPQAVFNVELKSFPGLG-----EEAARRLAALLR---GREGVWVSSFDPLALLALRKAAPGLPLGFLMAED-----HSALLPCLGVEAVHPHHALVTEEAVAGWRKRGLFVVAWTVNEEGEARRLLALGLDGLIGDRPEVLLPLG-


General information:
TITO was launched using:
RESULT:

Template: 1VD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90189 for 1854 contacts (-48.6/contact) +
2D Compatibility (PS) -23473 + (NN) -8837 + (LL) 1584
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -137065.0 ( -73.93 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_1VD6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VD6-query.scw
PDB file : Tito_Scwrl_1VD6.pdb: