Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MQLQTMSNSIFIKNLIFAINESLEYSE----TNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLK------ELISLVGREEAVLIFVNRLNEGL-----------------YCILNQLIEWDNLNYQFAMY-KEAMHNYLFNTIE--KLNDDTLFLLHQDGLITLPEH-KYKTVAVKS-TFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS-------------------------- |
| 3H2U Chain:B ((39-317)) | LDPEEIRKRLEHTERQFRNRRKILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAINAFHQSRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAALIAAQATA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27313 for 1377 contacts (-19.8/contact) +
2D Compatibility (PS) -22165 + (NN) -3125 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 1350
Total energy: -52753.0 ( -38.31 by residue)
QMean score : 0.152
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