Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWSELPRPFFILAP-MEDVTDIVFRHVVSEAARPDVFFTE-FTNTESFCHPEG-IHSVRGRLTFSEDEHPMVAHIWGDKPEQFRETSIQLAKMGFKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQATKAG-GLPVSVKTRLGYYEIDEWKDWLKHVFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPREHT--------SKELLDLLRLHLSLFNKYEKDEIRQFKSL-RRFFKIYVRGIRGASELRHQL---MNTQSIAE-ARALLDEFEAQMDEDVKIEL |
| 1VHN Chain:A ((5-309)) | -----------VKVGLAPMA-GYTDSAFRTLAFEW-GADFAFSEMVSAKGFL-----MNSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK-NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-------RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVE--MRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130749 for 2432 contacts (-53.8/contact) +
2D Compatibility (PS) -31177 + (NN) -14235 + (LL) 3172
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -189539.0 ( -77.94 by residue)
QMean score : 0.520
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