Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVK--PVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVR-NEKVYDQLSKIA-PTVSTDT--VF-K-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRAD-HTRIYA-GGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK |
| 2R7A Chain:A ((2-256)) | ----------------------------------------------------AERIVVAGGSLTELIYAMGAGERVVGVDETTS------YPP-ETAKLPHIGYWKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQNVAAKK-AP--VKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATH--------QQYKSYSAESLIAANPEVIVVTSQMVDG--------DINRLRSIAGITHTAAWKNQRII-TVDQNLILGMGPR-IA-DVVESLHQQLWPQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42738 for 1995 contacts (-21.4/contact) +
2D Compatibility (PS) -26470 + (NN) -12276 + (LL) 5080
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -84304.0 ( -42.26 by residue)
QMean score : 0.550
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