Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLI---PDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYRE----QYDKILLYSGNMGQLQDMETLISFLK-LNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNG--DAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK-- |
| 2IW1 Chain:A ((2-371)) | -----IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYT----------QSWEGDCPKAFELIQVPVKSHT-------NHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKG--------------FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR-NDVSELMAAADLLLHPAYQEAAG------IVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181941 for 2974 contacts (-61.2/contact) +
2D Compatibility (PS) -38378 + (NN) -15988 + (LL) 1652
1D Compatibility (HY) -2800 + (ID) 2100
Total energy: -239555.0 ( -80.55 by residue)
QMean score : 0.391
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