Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQI--------------NVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCP-----GNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTG----VYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNT--------LYENNNALEVIPGKMSLVIADIMDETTTKDKA-- |
| 4ID9 Chain:A ((21-341)) | M---ILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGA--FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRP--EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPAD-FAALLPKIAALTGLPIVTVDFPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ID9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107031 for 2341 contacts (-45.7/contact) +
2D Compatibility (PS) -30139 + (NN) -2113 + (LL) 536
1D Compatibility (HY) -3600 + (ID) 2600
Total energy: -144947.0 ( -61.92 by residue)
QMean score : 0.426
|
|
|