Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVNLIMTKERRTFSSEFKLQMVRLYKNGKL--KNEIIRKYDLKPSIISNSIKQHQ--NTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI-----
2JN6 Chain:A ((1-97))
----------MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1507 for 462 contacts (3.3/contact) +
2D Compatibility (PS) -9187 + (NN) -3543 + (LL) 1280
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -9543.0 ( -20.66 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: