Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQV---------------IA------------------EP--VNIICTHGT--MSIDKLDDMIES-----LYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
2P62 Chain:A ((2-111))
---RIKLIIVEGKTDESFFKVLLEKLYGFREAKKLTPEFPIGKWGFRIGEHPLVLEKDNIALVIIHAEGKQRIPK-VLKSVLDSVKLGLLNVEEVYVVRDVDEGNDV-FEWVLSF-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22110 for 381 contacts (-58.0/contact) +
2D Compatibility (PS) -7831 + (NN) -3266 + (LL) 4516
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -36091.0 ( -94.73 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2P62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P62-query.scw
PDB file :
Tito_Scwrl_2P62.pdb
: