Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDI-VK--ENPDVEIFEEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
1OR5 Chain:A ((6-77))
----DDLKKLLAETAGEDDSVDLAGELDTPFVDLG-YDSLALLETAAVLQQRYGIALTDETVGR--LGTPRELLDEVNT--
General information:
TITO was launched using:
RESULT:
Template:
1OR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30994 for 454 contacts (-68.3/contact) +
2D Compatibility (PS) -6947 + (NN) -1300 + (LL) 1052
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -42589.0 ( -93.81 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_1OR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR5-query.scw
PDB file :
Tito_Scwrl_1OR5.pdb
: