Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
1XG8 Chain:A ((-8-102))
AVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDLT---DHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
General information:
TITO was launched using:
RESULT:
Template:
1XG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 22146 for 690 contacts (32.1/contact) +
2D Compatibility (PS) -10003 + (NN) 174 + (LL) 148
1D Compatibility (HY) 2800 + (ID) 450
Total energy: 14815.0 ( 21.47 by residue)
QMean score : 0.022
(partial model without unconserved sides chains):
PDB file :
Tito_1XG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG8-query.scw
PDB file :
Tito_Scwrl_1XG8.pdb
: