Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVRMKFPNHPQVN-TVYGEINDIDLDAQIVSVG------NSKIDYDELIIGLGCEDKYHNVPGAEE-YTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRNF-PEKLSKYVAKWFAKNNVTVVPNSNINKVEPGK--I--YN-CDEPKDIDLVVWTAGIQPVE-VVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH--------APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG |
| 3IWA Chain:A ((4-348)) | -KHVVVIGAVALGPKAACRFKRL-D-PEAHVTMIDQA-------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA-GEVSKAVIVGGGFIGLEMAVSLADMW-GIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADG--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190559 for 2168 contacts (-87.9/contact) +
2D Compatibility (PS) -28614 + (NN) -13937 + (LL) 4508
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -243852.0 ( -112.48 by residue)
QMean score : 0.529
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