Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGDGAGAVIIGEVSEGRGIISYEMGSDG------TGGKHLY-------LDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQELKNGK--LKDDDTIVLVGFGGGLTWGAMTIKWGK |
| 3IL5 Chain:B ((33-339)) | ----------YVPENCVTNHQLSEMMDT-DEWIHSRTGISERRIVTQE-NTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLI-EAAETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIK---DVSQNIL--SLVTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142405 for 2626 contacts (-54.2/contact) +
2D Compatibility (PS) -31485 + (NN) -12935 + (LL) 788
1D Compatibility (HY) -25200 + (ID) 6000
Total energy: -217237.0 ( -82.73 by residue)
QMean score : 0.463
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