Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALI----K-QPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVK-HTLVFKGNFKMFYDKRG |
1VH5 Chain:A ((19-137)) | -------------------------------------------------------------------NMVGFLDIRFEHIGDDT-LEATMPVDSRTK-QPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAILE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57195 for 817 contacts (-70.0/contact) +
2D Compatibility (PS) -11744 + (NN) 1222 + (LL) 5488
1D Compatibility (HY) -400 + (ID) 550
Total energy: -63179.0 ( -77.33 by residue)
QMean score : 0.420
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