Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
3DMU Chain:A ((9-141)) | ---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTP---------EKYGPEASAFKKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2854 for 954 contacts (3.0/contact) +
2D Compatibility (PS) -13186 + (NN) -3876 + (LL) 3884
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -22674.0 ( -23.77 by residue)
QMean score : 0.472
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