Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYE-DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAG-K--GNDVLGILCHVDVVPAG--DGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEG--KAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQ-----------------AFVAFSNRYL---FNSDFGEKM------GMKFHTDVMGDVTTNIG-----V----ITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQY---GFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDM--TEPYTIGGGTYARNL-DKGVAFGAMFSDSE-DLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 2POK Chain:A ((35-481)) | --EKFEKDHVAQHYFEVLRTLISKKSVFAQQ---------VGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHA--DKLR--GADL-LVWEQGTKN-----------------------------A--LEQ-----------LEI--------------SGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78992 for 3160 contacts (-25.0/contact) +
2D Compatibility (PS) -43279 + (NN) -19983 + (LL) 5732
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -149622.0 ( -47.35 by residue)
QMean score : 0.384
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