Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
4IGA Chain:A ((6-121))
--KRVLIVDDAAFMRMMLKDII-TKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IGA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71045 for 984 contacts (-72.2/contact) +
2D Compatibility (PS) -12565 + (NN) -4333 + (LL) 9032
1D Compatibility (HY) -10800 + (ID) 1900
Total energy: -91611.0 ( -93.10 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_4IGA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IGA-query.scw
PDB file :
Tito_Scwrl_4IGA.pdb
: