Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGLKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALKSKY
2QFF Chain:A ((9-82))
---------------------------------------EYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKA-YALKSKDFKKMSEAKYQLQKIYNEIDEALK---
General information:
TITO was launched using:
RESULT:
Template:
2QFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5648 for 465 contacts (-12.1/contact) +
2D Compatibility (PS) -7963 + (NN) -3847 + (LL) 3132
1D Compatibility (HY) -6400 + (ID) 3100
Total energy: -23826.0 ( -51.24 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2QFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QFF-query.scw
PDB file :
Tito_Scwrl_2QFF.pdb
: